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Strongylocentrotus purpuratus download

Sequences

* Genome sequence (V0.5): Genome Sequence(Scaffold and Contig) of Strongylocentrotus purpuratus for 0.5 assembly
* Genome sequence (V2.1):Genome Sequence(Scaffold and Contig) of Strongylocentrotus purpuratus for 2.1 assembly
* Genome sequence (V2.5):Genome Sequence(Scaffold) of Strongylocentrotus purpuratus for 2.5 assembly
* Genome sequence (V2.6):Genome Sequence(Scaffold) of Strongylocentrotus purpuratus for 2.6 assembly
* Genome sequence (V3.1):Genome Sequence(Scaffold,scaffold sequence quality, Contig, AGP file, Contig quality and table listing GenBank accessionnumber for each contig) of Strongylocentrotus purpuratus for 0.5 assembly

Text files to build our annotation database for search function

Build7

Build6

Build5

Build4

gff3 files

These are files in gff3 format for various Strongylocentrotus purpuratus genome assembly. There are gff3 files for Scaffold(region), Contigs, Genes(GLEAN.gff3),BAC-END (for 3.1 assembly only), eBACs, Transcriptome(for 3.1 assembly only)and EST
gff3 file for 0.5 assembly
gff3 file for 2.1 assembly
gff3 file for 2.5 assembly
gff3 file for 2.6 assembly
gff3 file for 3.1 assembly

SpBase database backup file to build our whole database

Build5
Build6
Build 7

Patiria miniata download

Sequences

* Genome sequence (V1.0): Genome Sequence(Scaffold and Contig) of Patiria miniata for 1.0 assembly
* Patiria miniata genes and protein sequences predicted insilico by MAKER2 pipeline

gff3 files

These are files in gff3 format for Patiria miniata genome assembly. There are gff3 files for Scaffold(region), Contigs and Genes

Text files to build Patiria miniata annotation database for search function

* Gene search database
* Transcriptiome search database

Lytechinus variegatus download

Sequences

* Genome sequence (V0.4): Genome Sequence(Scaffold and Contig) of Lytechinus variegatus for 0.4 assembly
* Lytechinus variegatus genes and protein sequences predicted insilico by MAKER2 pipeline

gff3 files

These are files in gff3 format for Lytechinus variegatus genome assembly. There are gff3 files for Scaffold(region), Contigs and Genes

Text files to build Lytechinus variegatus annotation database for search function

* Gene search database
* Transcriptome search database